Merge branch 'develop' into 'master' (1c3d4598) · Commits · GUDMAP_RBK / RNA-seq · GitLab

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GUDMAP_RBK
RNA-seq
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1c3d4598

Commit 1c3d4598 authored 4 years ago by

Gervaise Henry

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Merge branch 'develop' into 'master'

Develop

See merge request !43

parents 7e35e638 770a16cf

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2 merge requests!78Master,!43Develop

Pipeline #8044 passed with stage

in 1 minute and 43 seconds

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.gitlab-ci.yml 165 additions, 3 deletions

.gitlab-ci.yml
CHANGELOG.md 30 additions, 2 deletions

CHANGELOG.md
README.md 7 additions, 0 deletions

README.md
docs/dag.png 0 additions, 0 deletions

docs/dag.png
test_data/createTestData.sh 10 additions, 6 deletions

test_data/createTestData.sh
workflow/conf/multiqc_config.yaml 43 additions, 2 deletions

workflow/conf/multiqc_config.yaml
workflow/nextflow.config 1 addition, 1 deletion

workflow/nextflow.config
workflow/rna-seq.nf 104 additions, 23 deletions

workflow/rna-seq.nf
workflow/scripts/calculateTPM.R 5 additions, 2 deletions

workflow/scripts/calculateTPM.R
workflow/scripts/convertGeneSymbols.R 6 additions, 4 deletions

workflow/scripts/convertGeneSymbols.R
workflow/tests/test_makeFeatureCounts.py 2 additions, 1 deletion

workflow/tests/test_makeFeatureCounts.py

with 373 additions and 44 deletions

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