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Commit 1168b330 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix raw count calculation

parent bb989a48
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2 merge requests!37v0.0.1,!36Metadata output update
Pipeline #7813 failed with stages
in 22 minutes and 45 seconds
......@@ -914,7 +914,7 @@ process fastqc {
fastqc *.fastq.gz -o .
# count raw reads
zcat *.R1.fastq.gz | echo $((`wc -l`/4)) > rawReads.csv
zcat *.R1.fastq.gz | echo \$((`wc -l`/4)) > rawReads.csv
"""
}
......
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