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Commit 0a986962 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix fail pre execution run

parent 73c9adac
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2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
Pipeline #8837 passed with stages
in 2 minutes and 36 seconds
......@@ -2122,7 +2122,7 @@ process failPreExecutionRun {
if [ "\${exist}" == "[]" ]
then
rid=\$(python3 ${script_uploadExecutionRun_failPreExecutionRun} -r ${repRID} -w \${workflow} -g \${genome} -i ${inputBagRID} -s Error -d "\${errorDetails}" -o ${source} -c \${cookie} -u F)
echo LOG: execution run RID uploaded - \${executionRun_rid} >> ${repRID}.failPreExecutionRun.log
echo LOG: execution run RID uploaded - \${rid} >> ${repRID}.failPreExecutionRun.log
else
rid=\$(echo \${exist} | grep -o '\\"RID\\":\\".*\\",\\"RCT')
rid=\${rid:7:-6}
......
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