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Commit 079c85ae authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix log in infer species if ambiguous

parent cccb4d9e
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2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
Pipeline #8857 canceled with stages
in 8 minutes and 27 seconds
......@@ -836,8 +836,9 @@ process inferMetadata {
bam="GRCm.sampled.sorted.bam"
bed="./GRCm/genome.bed"
fi
else
echo -e "LOG: inference of species results in: \${species}" >> ${repRID}.inferMetadata.log
fi
echo -e "LOG: inference of species results in: \${species}" >> ${repRID}.inferMetadata.log
# infer experimental setting from dedup bam
echo -e "LOG: infer experimental setting from dedup bam" >> ${repRID}.inferMetadata.log
......
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