Merge requests · BICF

Add License file 2 of 2 checklist items completed

BICF/Astrocyte/atacseq_analysis!18 · created Apr 06, 2020 by Venkat Malladi Version 2.0 master
updated May 07, 2020
Resolve "Need Zenodo registration"

BICF/Astrocyte/sra_pipeline!55 · created Apr 06, 2020 by Venkat Malladi
- Merged
- 2
updated Apr 20, 2020
Add in authorship for softare.

onboarding!22 · created Apr 02, 2020 by Venkat Malladi
- Merged
updated Apr 02, 2020
Fix so that runners don't collide and nextflow can continue. 0 of 2 checklist items completed

BICF/Astrocyte/atacseq_analysis!17 · created Mar 31, 2020 by Venkat Malladi master
updated May 08, 2020
Add in Authorship Guidelines

onboarding!21 · created Mar 31, 2020 by Venkat Malladi
- Merged
updated Mar 31, 2020
Ci merge test

BICF/Astrocyte/chipseq_analysis!68 · created Mar 28, 2020 by Venkat Malladi master
- Merged
- 6
updated Apr 16, 2020
Add -B option to output in fastq basecode format; Update Docs; Fix multiple Runs

BICF/Astrocyte/sra_pipeline!54 · created Mar 26, 2020 by Jeremy Mathews
Bug fixes error correction
- Merged
- 10
updated Jun 01, 2020
Resolve "Add percent of reads - mitochondria" 5 of 5 checklist items completed

BICF/Astrocyte/atacseq_analysis!16 · created Mar 24, 2020 by Holly Ruess Version 2.0 master
enhancment
- Merged
- 1
updated Mar 24, 2020
Resolve "Rename Plot profile to be consistent with naming" 4 of 4 checklist items completed

BICF/Astrocyte/chipseq_analysis!67 · created Mar 21, 2020 by Venkat Malladi 1.1.0
Test
- Merged
- 2
updated Apr 21, 2020
Update to test with new astrocyte runner. 0 of 4 checklist items completed

BICF/Astrocyte/chipseq_analysis!66 · created Mar 19, 2020 by Venkat Malladi 1.1.0 master
- Merged
- 1
updated Mar 21, 2020
Resolve "Generate MultiQC report"

BICF/Astrocyte/atacseq_analysis!15 · created Feb 25, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Feb 25, 2020
Resolve "BUG: thread error on Astrocyte"

BICF/Astrocyte/cellranger_count!59 · created Feb 21, 2020 by Gervaise Henry v2.1.1
Doing bug confirmed critical
updated Feb 21, 2020
Changed singularity container to allow for rendering of references. 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!65 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 18, 2020
Resolve "Python Version not in Software Version" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!64 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Mar 02, 2020
Resolve "Single Rep Pool and Pseudo" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!63 · created Feb 12, 2020 by Venkat Malladi 1.1.0 master
bug
- Merged
- 3
updated Mar 24, 2020
Resolve "callPeaksMACS exits when data is bad" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!62 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 29, 2020
Update index.md to match ReadMe.md

BICF/Astrocyte/sra_pipeline!53 · created Feb 07, 2020 by Jonathan Gesell
Bug fixes
updated Feb 07, 2020
Update README.md

BICF/Astrocyte/sra_pipeline!52 · created Feb 06, 2020 by Jonathan Gesell
updated Feb 06, 2020
Corrected typos in ReadMe.md

BICF/Astrocyte/sra_pipeline!51 · created Feb 06, 2020 by Jonathan Gesell
Updates error correction
updated Feb 06, 2020
Resolve "Update to Singularity Image 2.0.0 compatability."

BICF/Astrocyte/sra_pipeline!50 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
updated Feb 06, 2020