Merge requests · BICF

Update CHANGELOG.md, workflow/main.nf, workflow/nextflow.config files

BICF/Astrocyte/cellranger_count!79 · created Aug 15, 2020 by Gervaise Henry 2.2.0 master
- Merged
- 0
updated Aug 15, 2020
Develop

BICF/Astrocyte/cellranger_count!78 · created Aug 15, 2020 by Gervaise Henry 2.2.0 master
- Merged
- 0
updated Aug 15, 2020
Updated Zenodo id 0 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!77 · created Aug 15, 2020 by Venkat Malladi 2.2.0
To Do
- Closed
- 3
updated Aug 15, 2020
"Update doi in Readme" 3 of 7 checklist items completed

BICF/Astrocyte/sra_pipeline!62 · created Jun 17, 2020 by Venkat Malladi
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- 0
updated Aug 15, 2020
Resolve "Generate Raw RDS file" 7 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!76 · created Aug 14, 2020 by Gervaise Henry 2.2.0
Doing enhancement
- Merged
- 0
updated Aug 14, 2020
Cellranger 4.0.0 ref 2020 a

BICF/Astrocyte/cellranger_count!75 · created Aug 13, 2020 by Gervaise Henry 2.2.0 50-seurat.object
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updated Aug 13, 2020
Issue3087 annotation fix 0 of 7 checklist items completed

BICF/Astrocyte/chipseq_analysis!72 · created Aug 07, 2020 by Spencer Barnes
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updated Aug 07, 2020
Publish 2.0.4

BICF/Astrocyte/atacseq_analysis!31 · created Jul 31, 2020 by Venkat Malladi master
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updated Jul 31, 2020
Update configuration for queue to fix large number of reads. 2 of 2 checklist items completed

BICF/Astrocyte/atacseq_analysis!30 · created Jul 28, 2020 by Venkat Malladi
bug critical
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- 0
updated Jul 29, 2020
Cellranger 4.0.0 ref 2020 a

BICF/Astrocyte/cellranger_mkfastq!70 · created Jul 22, 2020 by Gervaise Henry containerize
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updated Jul 22, 2020
Resolve "Update outside collaboration fee structure"

onboarding!26 · created Jul 14, 2020 by Venkat Malladi
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updated Jul 14, 2020
Add in astrocyte 0.3.1 test. 0 of 3 checklist items completed

BICF/Astrocyte/atacseq_analysis!29 · created Jun 29, 2020 by Venkat Malladi Version 2.1.0
documentation enhancment
- Merged
- 1
updated Jul 01, 2020
Update astrocyte to 0.3.1 0 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!71 · created Jun 29, 2020 by Venkat Malladi 2.0.0
documentation enhancement
- Merged
- 1
updated Jul 01, 2020
Add in pipelinetracking. 0 of 1 checklist item completed

BICF/Astrocyte/chipseq_analysis!70 · created Jun 21, 2020 by Venkat Malladi
- Merged
- 1
updated Jun 23, 2020
Fix multi sample, local ulimit set, v2.1.1

BICF/Astrocyte/cellranger_count!74 · created Jun 21, 2020 by Gervaise Henry v2.1.1 master
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- 0
updated Jun 21, 2020
Fix local process ulimit set

BICF/Astrocyte/cellranger_mkfastq!69 · created Jun 21, 2020 by Gervaise Henry v2.1.5 master
- Merged
- 0
updated Jun 21, 2020
Develop

BICF/Astrocyte/cellranger_count!73 · created Jun 21, 2020 by Gervaise Henry v2.1.1 master
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- 0
updated Jun 21, 2020
Update configs folder name 0 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!72 · created Jun 21, 2020 by Gervaise Henry v2.1.1
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- 0
updated Jun 21, 2020
De containerize 2 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!71 · created Jun 21, 2020 by Gervaise Henry v2.1.1
- Merged
- 0
updated Jun 21, 2020
Develop

BICF/Astrocyte/cellranger_mkfastq!68 · created Jun 21, 2020 by Gervaise Henry v2.1.5 master
- Merged
- 0
updated Jun 21, 2020