Merge requests · BICF

add collaborations readme and images

onboarding!3 · created Jan 14, 2019 by Spencer Barnes
- Merged
- 2
updated Jan 14, 2019
Added in more members.

onboarding!4 · created Jan 14, 2019 by Venkat Malladi
- Merged
updated Jan 14, 2019
Resolve "Add in current chip-analysis functionality."

BICF/Astrocyte/chipseq_analysis!18 · created Jan 11, 2019 by Venkat Malladi 1.0.0 master
enhancement
updated Jan 11, 2019
add help desk markdown

onboarding!2 · created Jan 04, 2019 by Holly Ruess
- Merged
- 2
updated Jan 08, 2019
Add option for outdir.

BICF/Astrocyte/chipseq_analysis!16 · created Jan 06, 2019 by Venkat Malladi master
- Merged
- 1
updated Jan 06, 2019
25 pairedend qc

BICF/Astrocyte/chipseq_analysis!15 · created Jan 05, 2019 by Venkat Malladi master
- Merged
- 1
updated Jan 06, 2019
add Holly's ORCID

onboarding!1 · created Dec 13, 2018 by Holly Ruess
- Merged
- 2
updated Dec 13, 2018
Shiny update

BICF/Astrocyte/rnaseq!1 · created May 09, 2018 by Danni Luo
- Merged
- 2
updated Nov 19, 2018
updated all processes to use samtools/1.6

BICF/Astrocyte/chipseq_analysis!14 · created Aug 02, 2018 by Jonathan Gesell master
- Merged
updated Aug 02, 2018
Corrected issue where a gene with 0 read counts could crash the dea.R scripts.

BICF/Astrocyte/rnaseq!3 · created Jun 27, 2018 by Jonathan Gesell
updated Jun 27, 2018
Resolve "Add in Macs2 support"

BICF/Astrocyte/chipseq_analysis!13 · created Nov 20, 2017 by Venkat Malladi master
updated Nov 20, 2017
Resolve "Pool and Pseudoreplication"

BICF/Astrocyte/chipseq_analysis!12 · created Oct 30, 2017 by Venkat Malladi master
updated Oct 30, 2017
Resolve "Include Phantompeakqualtools step"

BICF/Astrocyte/chipseq_analysis!11 · created Oct 24, 2017 by Venkat Malladi master
updated Oct 24, 2017
Resolve "Make tagAlign files"

BICF/Astrocyte/chipseq_analysis!10 · created Oct 23, 2017 by Venkat Malladi master
updated Oct 23, 2017
Remove fastqc step.

BICF/Astrocyte/chipseq_analysis!9 · created Oct 18, 2017 by Venkat Malladi master
updated Oct 18, 2017
Resolve "Update deeptools"

BICF/Astrocyte/chipseq_analysis!8 · created Oct 18, 2017 by Venkat Malladi 1.0.0 master
updated Oct 18, 2017
Add in experiment_id and check to see if unique replicate ids are given.

BICF/Astrocyte/chipseq_analysis!7 · created Oct 11, 2017 by Venkat Malladi master
updated Oct 11, 2017
Resolve "Bam Stats and Filter"

BICF/Astrocyte/chipseq_analysis!6 · created Oct 11, 2017 by Venkat Malladi master
updated Oct 11, 2017
Resolve "Add mapping and trimming"

BICF/Astrocyte/chipseq_analysis!5 · created Oct 09, 2017 by Venkat Malladi master
updated Oct 09, 2017
Resolve "Add in Fastqc"

BICF/Astrocyte/chipseq_analysis!4 · created Sep 30, 2017 by Venkat Malladi master
updated Sep 30, 2017