Explore projects
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An example workflow package for the BioHPC Astrocyte workflow engine.
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BioHPC / param_runner
GNU General Public License v3.0 or laterParameter exploration job runner for the BioHPC nucleus cluster.
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GCRB / gcrb_atacseq_web
OtherAn example of ATAC-seq using BioHPC Astrocyte workflow engine.
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Quick and dirty singularity bootstrap definitions for all biocontainers.
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BioHPC / clair-singularity
BSD 3-Clause "New" or "Revised" LicenseScan Singularity container images using a Clair server
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BICF / Software / FMAP
OtherFunctional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies
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BioHPC / singularity
BSD 3-Clause "New" or "Revised" LicenseBioHPC Singularity tree with non-core patches
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Strand Lab / sc-TissueMapper_Pr
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Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data
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BICF / Astrocyte / cellranger_count
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Strand Lab / sc-TissueMapper
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BICF / Software / TReNCo
MIT LicenseTAD aware Regulatory Network Construction (TReNCo). The package provides scripts for constructing cell-type specific mouse TF-gene networks.
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