Explore projects
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Lauren McCormick / simulate-MT-44
GNU Affero General Public License v3.0Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".
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PIRL / Kalata Filters - MATLAB
MIT LicenseImplementations of the Kalata filters described in D.S. O'Kelly, Y. Guo, R.P. Mason. Evaluating online filtering algorithms to enhance dynamic multispectral optoacoustic tomography, Photoacoustics (2020)
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Nihal Temamogullari / Tu_2019_image_processing
GNU General Public License v3.0 onlyUpdated -
This project houses code from the Meeks Lab and TIBIR Whole Brain Microscopy Facility that facilitates image registration and analysis
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DanuserLab / DeBias
MIT LicenseDeBias decouples global bias from direct interactions in co-orientation and co-localization data.
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BioHPC / param_runner
GNU General Public License v3.0 or laterParameter exploration job runner for the BioHPC nucleus cluster.
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