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A repository for code to replicate the analysis of single cell data from female human urethra.

Files from the Advanced Concepts of Deep Learning Nanocourse

TAD aware Regulatory Network Construction (TReNCo). The package provides scripts for constructing cell-type specific mouse TF-gene networks.

A Flywheel gear to import MEG metadata from files

The flash-community FTP project allows users to share their files with guests.

An example workflow package for the BioHPC Astrocyte workflow engine.

Know-how, trouble-shooting, work log, and memo, etc.

FLywheel Gearification of https://gitlab.com/Michael_Paris/AutoMATiCA/

Transcript Analyzer is a module that aids in looking at and identifying target phrases in transcripts. There are two main files ProbTimeSeries.py and TranscriptAnalyzer.py the latter of which uses Streamlit to create an app

Notebooks and scripts provided here can be used for analyzing data files generated by Tecan and Biotek plate readers.

BioHPC Singularity tree with non-core patches

Quick and dirty singularity bootstrap definitions for all biocontainers.

Contains various scripts used for all data analysis in Bacon_et_al_Mol_Cell_2020.

This repo is designed to provide a set of scripts that models microbial communities using generalized Lotka-Volterra equations.