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Commit c12be42f authored by John Lafin's avatar John Lafin
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Use CxG 1.2.0 container

parent bf0899b5
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Tags test_0.0.5
1 merge request!1Convert input
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astrocyte_pkg.yml
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View file @ c12be42f
...@@ -132,7 +132,7 @@ workflow_parameters: ...@@ -132,7 +132,7 @@ workflow_parameters:
# List of any full path of the containers # List of any full path of the containers
vizapp_containers: vizapp_containers:
- docker://git.biohpc.swmed.edu:5050/astrocyte/workflows/strand-lab/cellxgene:latest - docker://git.biohpc.swmed.edu:5050/astrocyte/workflows/strand-lab/cellxgene/cellxgene:1.2.0
# List of any path of the scripts in 'your_astrocyte_workflow/vizapp' folder to run the containers # List of any path of the scripts in 'your_astrocyte_workflow/vizapp' folder to run the containers
vizapp_container_runscripts: vizapp_container_runscripts:
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vizapp/run_container.sh
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...@@ -13,8 +13,8 @@ DIR=$( cd -P "$( dirname "$SOURCE" )" >/dev/null 2>&1 && pwd ) ...@@ -13,8 +13,8 @@ DIR=$( cd -P "$( dirname "$SOURCE" )" >/dev/null 2>&1 && pwd )
# Image settings # Image settings
REPO="cellxgene" REPO="cellxgene/cellxgene"
TAG="latest" TAG="1.2.0"
singularity_image=${REPO}-${TAG}.img singularity_image=${REPO}-${TAG}.img
outputDir=${outputDir:-"${DIR}/../workflow/output/"} outputDir=${outputDir:-"${DIR}/../workflow/output/"}
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