Commits · d41309dc1eeb5a6c91e28674f69d70adc6004fbf · Astrocyte / Workflows / BICF / chipseq_analysis

Jul 12, 2019
- Add Plot Profile. Add python version to multiqc. · d41309dc
  Jeremy Mathews authored 5 years ago
  
  d41309dc
Jul 09, 2019
- Update gitignore with nextflow and update software reference test · 567ee0eb
  Jeremy Mathews authored 5 years ago
  
  567ee0eb
May 31, 2019
- Merge branch '55-CheckGenomeMapPeaks' into 'master' · aff51033
  Venkat Malladi authored 5 years ago
```
Fix fasta file refernce and add check for correct genome version

Closes #55 and #56

See merge request !49
```
  publish_1.0.6
  
  aff51033
- Update references.md to add Jermey · 8ca60229
  Venkat Malladi authored 5 years ago
  
  8ca60229
- Update LICENSE.md to include Jermey · aa78f939
  Venkat Malladi authored 5 years ago
  
  aa78f939
- Update README.md to reflect new release · e06c8035
  Venkat Malladi authored 5 years ago
  
  e06c8035
- Update CHANGELOG.md to include new additions and fixes · 9738f5d1
  Venkat Malladi authored 5 years ago
  
  9738f5d1
May 30, 2019
- Error Check Update Path Name for paired-end · ebede896
  Jeremy Mathews authored 5 years ago
  
  ebede896
May 29, 2019
- Error Check Update path name · 44edba97
  Jeremy Mathews authored 5 years ago
  
  44edba97
May 28, 2019
- 56-Error check in test_motif_search.py for non empty fa file · b127caa6
  Jeremy Mathews authored 5 years ago
  
  b127caa6
- Comment Licensing in R scripts · cb87ab30
  Jeremy Mathews authored 5 years ago
  
  cb87ab30
May 24, 2019
- 56-part a-Remove .txt from reference fasta file · 965d0dd5
  Jeremy Mathews authored 5 years ago
  
  965d0dd5
- 55-Fail Pipeline if wrong genome is selected · 730a2da3
  Jeremy Mathews authored 5 years ago
  
  730a2da3
May 17, 2019
- Merge branch '54-fix-spacing' into 'master' · 6cf95be0
  Venkat Malladi authored 5 years ago
```
Fix spacing.

Closes #54

See merge request !48
```
  6cf95be0
- Fix spacing. · 963d83e9
  Venkat Malladi authored 5 years ago
  
  963d83e9
- Merge branch '53-license' into 'master' · e74bfaa8
  Venkat Malladi authored 5 years ago
```
Resolve "Add license"

Closes #53

See merge request !47
```
  e74bfaa8
- Update Change log. · 0acf1a6b
  Venkat Malladi authored 5 years ago
  
  0acf1a6b
- Update tests to pass. · b8fbc47f
  Venkat Malladi authored 5 years ago
  
  b8fbc47f
- Add license for scripts. · 151ac16b
  Venkat Malladi authored 5 years ago
  
  151ac16b
- Add license to main.nf. · 8037f1ec
  Venkat Malladi authored 5 years ago
  
  8037f1ec
- Add in License. · 9a1711cf
  Venkat Malladi authored 5 years ago
  
  9a1711cf
- Update merge request templates. · 6261b7c3
  Venkat Malladi authored 5 years ago
  
  6261b7c3
- Add in logo for BICF. · 0a27c272
  Venkat Malladi authored 5 years ago
  
  0a27c272
- Updated references. · 6d1822b1
  Venkat Malladi authored 5 years ago
  
  6d1822b1
May 16, 2019
- Merge branch '52-outstading-bugs' into 'master' · f5301081
  Venkat Malladi authored 5 years ago
```
Resolve "Astrocyte Bug Fixes"

Closes #52

See merge request BICF/Astrocyte/chipseq_analysis!46
```
  publish_1.0.5
  
  f5301081
- fixed links in README and references · fdd81bad
  Holly Ruess authored 5 years ago
  
  fdd81bad
- Update changelong to 1.0.5. · cbcf8c7b
  Venkat Malladi authored 5 years ago
  
  cbcf8c7b
- Fix parsing of analysis. · d16229c2
  Venkat Malladi authored 5 years ago
  
  d16229c2
- Make test more generic. · 051d31fa
  Venkat Malladi authored 5 years ago
  
  051d31fa
- Update link. · b3b80117
  Venkat Malladi authored 5 years ago
  
  b3b80117
May 15, 2019
- Merge branch '51-templates' into 'master' · a95135a2
  Venkat Malladi authored 5 years ago
```
Add in initial template.

Closes #51

See merge request BICF/Astrocyte/chipseq_analysis!45
```
  a95135a2
- Add in initial template. · bf32f4a9
  Venkat Malladi authored 5 years ago
  
  bf32f4a9
- Merge branch '50-change-peak-comparisons' into 'master' · 67a933e1
  Venkat Malladi authored 5 years ago
```
Resolve "Change Tests for Peak comparison to be greater than or equal to"

Closes #50

See merge request BICF/Astrocyte/chipseq_analysis!44
```
  67a933e1
- Updated to generic references with new version. · 677b037e
  Venkat Malladi authored 5 years ago
  
  677b037e
- Updated to generic references with new version. · ac7c8fff
  Venkat Malladi authored 5 years ago
  
  ac7c8fff
- Add in changelog. · e429d36a
  Venkat Malladi authored 5 years ago
  
  e429d36a
- Merge branch '48-single-control' into 'master' · 1ca6b372
  Venkat Malladi authored 5 years ago
```
updated script pool_and_psuedoreplicates

Closes #48

See merge request !43
```
  1ca6b372
- Merge branch '46-astrocyte-links' into 'master' · df5a964e
  Venkat Malladi authored 5 years ago
```
Resolve "Fix Astrocyte links"

Closes #46

See merge request !41
```
  df5a964e
- Update phantompeaks.md · d3df5095
  Venkat Malladi authored 5 years ago
  
  d3df5095
- Merge branch '43-motif-search-fix' into 'master' · 25925593
  Venkat Malladi authored 5 years ago
```
Add in python3 for motif serach.

Closes #43

See merge request !40
```
  25925593