Commits · 151ac16babee9fe5f3c4c16074b17bab87104aca · Astrocyte / Workflows / BICF / chipseq_analysis

May 17, 2019
- Add license for scripts. · 151ac16b
  Venkat Malladi authored 5 years ago
  
  151ac16b
- Add license to main.nf. · 8037f1ec
  Venkat Malladi authored 5 years ago
  
  8037f1ec
- Add in License. · 9a1711cf
  Venkat Malladi authored 5 years ago
  
  9a1711cf
- Update merge request templates. · 6261b7c3
  Venkat Malladi authored 5 years ago
  
  6261b7c3
- Add in logo for BICF. · 0a27c272
  Venkat Malladi authored 5 years ago
  
  0a27c272
- Updated references. · 6d1822b1
  Venkat Malladi authored 5 years ago
  
  6d1822b1
May 16, 2019
- Merge branch '52-outstading-bugs' into 'master' · f5301081
  Venkat Malladi authored 5 years ago
```
Resolve "Astrocyte Bug Fixes"

Closes #52

See merge request BICF/Astrocyte/chipseq_analysis!46
```
  publish_1.0.5
  
  f5301081
- fixed links in README and references · fdd81bad
  Holly Ruess authored 5 years ago
  
  fdd81bad
- Update changelong to 1.0.5. · cbcf8c7b
  Venkat Malladi authored 5 years ago
  
  cbcf8c7b
- Fix parsing of analysis. · d16229c2
  Venkat Malladi authored 5 years ago
  
  d16229c2
- Make test more generic. · 051d31fa
  Venkat Malladi authored 5 years ago
  
  051d31fa
- Update link. · b3b80117
  Venkat Malladi authored 5 years ago
  
  b3b80117
May 15, 2019
- Merge branch '51-templates' into 'master' · a95135a2
  Venkat Malladi authored 5 years ago
```
Add in initial template.

Closes #51

See merge request BICF/Astrocyte/chipseq_analysis!45
```
  a95135a2
- Add in initial template. · bf32f4a9
  Venkat Malladi authored 5 years ago
  
  bf32f4a9
- Merge branch '50-change-peak-comparisons' into 'master' · 67a933e1
  Venkat Malladi authored 5 years ago
```
Resolve "Change Tests for Peak comparison to be greater than or equal to"

Closes #50

See merge request BICF/Astrocyte/chipseq_analysis!44
```
  67a933e1
- Updated to generic references with new version. · 677b037e
  Venkat Malladi authored 5 years ago
  
  677b037e
- Updated to generic references with new version. · ac7c8fff
  Venkat Malladi authored 5 years ago
  
  ac7c8fff
- Add in changelog. · e429d36a
  Venkat Malladi authored 5 years ago
  
  e429d36a
- Merge branch '48-single-control' into 'master' · 1ca6b372
  Venkat Malladi authored 5 years ago
```
updated script pool_and_psuedoreplicates

Closes #48

See merge request BICF/Astrocyte/chipseq_analysis!43
```
  1ca6b372
- Merge branch '46-astrocyte-links' into 'master' · df5a964e
  Venkat Malladi authored 5 years ago
```
Resolve "Fix Astrocyte links"

Closes #46

See merge request BICF/Astrocyte/chipseq_analysis!41
```
  df5a964e
- Update phantompeaks.md · d3df5095
  Venkat Malladi authored 5 years ago
  
  d3df5095
- Merge branch '43-motif-search-fix' into 'master' · 25925593
  Venkat Malladi authored 5 years ago
```
Add in python3 for motif serach.

Closes #43

See merge request BICF/Astrocyte/chipseq_analysis!40
```
  25925593
- Merge branch '42-astrocyte-skip-doc-fix' into 'master' · 82967aa1
  Venkat Malladi authored 5 years ago
```
Update descirption for variables.

Closes #42

See merge request BICF/Astrocyte/chipseq_analysis!39
```
  82967aa1
May 14, 2019
- Make test data more generic. · 062733a0
  Venkat Malladi authored 5 years ago
  
  062733a0
- Add in our own phantompeak tools documentation. · 9d7616be
  Venkat Malladi authored 5 years ago
  
  9d7616be
- Update descirption for variables. · 14f6a25a
  Venkat Malladi authored 5 years ago
  
  14f6a25a
- Add in python3 for motif serach. · 2c56b9c7
  Venkat Malladi authored 5 years ago
  
  2c56b9c7
- updated script pool_and_psuedoreplicates · f3bffff1
  Holly Ruess authored 5 years ago
  
  f3bffff1
May 06, 2019
- Merge branch '41-filepath-designfile' into 'master' · 6d87301c
  Venkat Malladi authored 5 years ago
```
Resolve "DesignFile path not followed"

Closes #41

See merge request !38
```
  publish_1.0.3
  
  6d87301c
- Covert back to files. · b18ced81
  Venkat Malladi authored 5 years ago
  
  b18ced81
- Fix association of file path. · cd167def
  Venkat Malladi authored 5 years ago
  
  cd167def
- Update main.nf to have file path for main.nf. · 9c53690d
  Venkat Malladi authored 5 years ago
  
  9c53690d
- Merge branch '40-astrocyte-design-file' into 'master' · 60d23c92
  Venkat Malladi authored 5 years ago
```
Fix astrocyte yml name fix.

Closes #40

See merge request BICF/Astrocyte/chipseq_analysis!37
```
  60d23c92
- Fix astrocyte yml name fix. · 8a267280
  Venkat Malladi authored 5 years ago
  
  8a267280
- Merge branch '8-update-documentation' into 'master' · 304683ef
  Venkat Malladi authored 5 years ago
```
Resolve "Update documentation"

Closes #8

See merge request !35
```
  publish_1.0.0
  
  304683ef
- Update diff peaks. · aa328cd4
  Venkat Malladi authored 5 years ago
  
  aa328cd4
May 05, 2019
- Add in authors. · d9a7f041
  Venkat Malladi authored 5 years ago
  
  d9a7f041
May 02, 2019
- Updated changes suggested by Spencer and fix pipeline error. · 41fcff0b
  Venkat Malladi authored 5 years ago
  
  41fcff0b
Apr 29, 2019
- Merge branch 'master' into '8-update-documentation' · 5f54d2ec
  Venkat Malladi authored 5 years ago
```
# Conflicts:
#   docs/index.md
```
  5f54d2ec
Apr 26, 2019
- updated documentation · f723bd56
  Holly Ruess authored 5 years ago
  
  f723bd56