Use 256 queue only for trim reads step to avoid samtools call in map_reads.py:wq

workflow/configs/biohpc.config

@@ -29,7 +29,7 @@ process {
   }
   withName: alignReads{
     container = 'docker://git.biohpc.swmed.edu:5050/astrocyte/workflows/bicf/chipseq_analysis/chipseq:1.0.0'
-    queue = '128GB,256GB,256GBv1'
+    queue = '256GB,256GBv1'
     cpus = 32
   }
   withName: filterReads{

workflow/main.nf

@@ -207,7 +207,7 @@ process trimReads {
 // Align trimmed reads using bwa
 process alignReads {
 
-  queue '128GB,256GB,256GBv1'
+  queue '256GB,256GBv1'
   tag "$sampleId-$replicate"
   publishDir "$outDir/${task.process}/${sampleId}", mode: 'copy'