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Astrocyte
Astrocyte Container Images
Commits
901c6f31
Commit
901c6f31
authored
1 year ago
by
Peng Lian
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Add Quarto 1.3.433
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590ad6a8
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View file @
901c6f31
FROM
ubuntu:20.04
LABEL
CONTAINER_VERSION="0.0.2" \
AUTHOR="Peng Lian" \
EMAIL="biohpc-help@utsouthwestern.edu"
# build-time varialbes
ARG
http_proxy=http://proxy.swmed.edu:3128/
ARG
https_proxy=http://proxy.swmed.edu:3128/
ARG
no_proxy="*.swmed.edu,*.swmed.org,*.utsouthwestern.edu,localhost,127.0.0.1/8"
ENV
http_proxy="${http_proxy}" \
https_proxy="${https_proxy}" \
no_proxy="${no_proxy}"
RUN
apt-get update
&&
\
DEBIAN_FRONTEND
=
"noninteractive"
apt-get
install
-y
--no-install-recommends
\
locales
\
curl
\
pip
\
jupyter
\
python3-numpy
\
python3-matplotlib
\
&&
\
\
apt-get autoclean
-y
&&
\
apt-get autoremove
-y
&&
\
rm
-rf
/var/cache/apt /var/lib/apt/lists
RUN
apt-get update
&&
\
DEBIAN_FRONTEND
=
"noninteractive"
apt-get
install
-y
--no-install-recommends
\
pandoc
\
texlive-xetex
\
&&
\
\
apt-get autoclean
-y
&&
\
apt-get autoremove
-y
&&
\
rm
-rf
/var/cache/apt /var/lib/apt/lists
RUN
apt-get update
&&
\
DEBIAN_FRONTEND
=
"noninteractive"
apt-get
install
-y
--no-install-recommends
\
build-essential
\
r-base-core
\
wkhtmltopdf
\
&&
\
\
Rscript
-e
'install.packages("rmarkdown")'
&&
\
apt-get purge
-y
build-essential
&&
\
apt-get autoclean
-y
&&
\
apt-get autoremove
-y
&&
\
rm
-rf
/var/cache/apt /var/lib/apt/lists
RUN
pip
install
nbclient matplotlib-inline
ENV
LANG en_US.UTF-8
RUN
locale-gen en_US.UTF-8
ARG
PANDOC_VERSION="3.1.4"
RUN
curl
-o
pandoc-linux-amd64.deb
-L
https://github.com/jgm/pandoc/releases/download/
${
PANDOC_VERSION
}
/pandoc-
${
PANDOC_VERSION
}
-1-amd64
.deb
&&
\
dpkg
-i
pandoc-linux-amd64.deb
&&
\
rm
-f
pandoc-linux-amd64.deb
ARG
QUARTO_VERSION="1.3.433"
RUN
curl
-o
quarto-linux-amd64.deb
-L
https://github.com/quarto-dev/quarto-cli/releases/download/v
${
QUARTO_VERSION
}
/quarto-
${
QUARTO_VERSION
}
-linux-amd64
.deb
&&
\
dpkg
-i
quarto-linux-amd64.deb
&&
\
rm
-f
quarto-linux-amd64.deb
RUN
quarto tools
install
chromium
&&
\
quarto tools list
RUN
/usr/local/bin/quarto check
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