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Commit 96eee387 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Update D17 bash script

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bash.scripts/sc_FullAnalysis-D17PrF.sh
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− 6
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......@@ -13,12 +13,12 @@ module load R/3.4.1-gccmkl
Rscript ../r.scripts/sc_Demultiplex.R --p="D17PrF" --d=3
Rscript ../r.scripts/sc_Seurat.Score.CellCycle.R --p="D17PrF"
Rscript ../r.scripts/sc_QC.R --p="D17PrF"
Rscript ../r.scripts/sc_Cluster.R --p="D17PrF"
Rscript ../r.scripts/sc_PC.Score.Stress.R --p="D17PrF"
Rscript ../r.scripts/sc_QuSAGE.Lineage.R --p="D17PrF"
Rscript ../r.scripts/sc_LineageSubClust.R --p="D17PrF"
Rscript ../r.scripts/sc_QuSAGE_EpiSubClust.R --p="D17PrF" --r=0.2
Rscript ../r.scripts/sc_QuSAGE_StSubClust.R --p="D17PrF" --r=0.2
Rscript ../r.scripts/sc_Cluster.R --p="D17PrF" --pc=0
Rscript ../r.scripts/sc_PC.Score.Stress.R --p="D17PrF" --r=0.5 --pc=0
Rscript ../r.scripts/sc_QuSAGE.Lineage.R --p="D17PrF" --r=0.1 --s=NA
Rscript ../r.scripts/sc_LineageSubClust.R --p="D17PrF" --pc=0
Rscript ../r.scripts/sc_QuSAGE_EpiSubClust.R --p="D17PrF" --r=0.1 --s=NA
Rscript ../r.scripts/sc_QuSAGE_StSubClust.R --p="D17PrF" --r=0.1 --s=NA
Rscript ../r.scripts/sc_MergeSubClust.R --p="D17PrF"
Rscript ../r.scripts/sc_PC.Score.NE.R --p="D17PrF"
Rscript ../r.scripts/sc_DEG.R --p="D17PrF"
......
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