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Commit 5cb8b844 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Update bash scripts, link data and use new R/3.4.1

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#!/bin/bash #!/bin/bash
#SBATCH --job-name R_FullAnalysis #SBATCH --job-name R_FullAnalysis.D17FACS
#SBATCH -p 256GB,256GBv1,384GB #SBATCH -p 256GB,256GBv1,384GB
#SBATCH -N 1 #SBATCH -N 1
#SBATCH -t 7-0:0:0 #SBATCH -t 7-0:0:0
...@@ -8,6 +8,8 @@ ...@@ -8,6 +8,8 @@
#SBATCH --mail-type ALL #SBATCH --mail-type ALL
#SBATCH --mail-user gervaise.henry@utsouthwestern.edu #SBATCH --mail-user gervaise.henry@utsouthwestern.edu
module load R/3.4.1-gccmkl module load R/3.4.1-gccmkl_20181025
sh ./sc_LinkData.sh D17_FACS
Rscript ../r.scripts/sc-TissueMapper_RUN.D17_FACS.R Rscript ../r.scripts/sc-TissueMapper_RUN.D17_FACS.R
#!/bin/bash #!/bin/bash
#SBATCH --job-name R_FullAnalysis #SBATCH --job-name R_FullAnalysis.D27FACS
#SBATCH -p 256GB,256GBv1,384GB #SBATCH -p 256GB,256GBv1,384GB
#SBATCH -N 1 #SBATCH -N 1
#SBATCH -t 7-0:0:0 #SBATCH -t 7-0:0:0
...@@ -8,6 +8,8 @@ ...@@ -8,6 +8,8 @@
#SBATCH --mail-type ALL #SBATCH --mail-type ALL
#SBATCH --mail-user gervaise.henry@utsouthwestern.edu #SBATCH --mail-user gervaise.henry@utsouthwestern.edu
module load R/3.4.1-gccmkl module load R/3.4.1-gccmkl_20181025
sh ./sc_LinkData.sh D27_FACS
Rscript ../r.scripts/sc-TissueMapper_RUN.D27_FACS.R Rscript ../r.scripts/sc-TissueMapper_RUN.D27_FACS.R
#!/bin/bash #!/bin/bash
#SBATCH --job-name R_FullAnalysis #SBATCH --job-name R_FullAnalysis.Pd
#SBATCH -p 256GB,256GBv1,384GB #SBATCH -p 256GB,256GBv1,384GB
#SBATCH -N 1 #SBATCH -N 1
#SBATCH -t 7-0:0:0 #SBATCH -t 7-0:0:0
...@@ -8,6 +8,8 @@ ...@@ -8,6 +8,8 @@
#SBATCH --mail-type ALL #SBATCH --mail-type ALL
#SBATCH --mail-user gervaise.henry@utsouthwestern.edu #SBATCH --mail-user gervaise.henry@utsouthwestern.edu
module load R/3.4.1-gccmkl module load R/3.4.1-gccmkl_20181025
Rscript ../r.scripts/sc-TissueMapper_RUN.Pd.R sh ./sc_LinkData.sh Pd
\ No newline at end of file
Rscript ../r.scripts/sc-TissueMapper_RUN.Pd.R
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