@@ -6,7 +6,7 @@ This is an R program to visualize and analyze -omics data such as those from mic
## Current version: 1.7.4. Tested R versions: 4.0.2, 3.5.1.
**Highlighted changes:** Metabolite Set Enrichment Analysis (MSEA) is implemented using MetaboAnalystR 3.0.3. If a list of feature IDs is supplied, the Over Representation Analysis (ORA) can be done. If a differential test is specified, the Quantitative Enrichment Analysis (QEA) can be done. To do the analysis, features need to be either HMDB or KEGG IDs, or a mixture of them. Alternatively, features can be metabolite names available in the MetaboAnalyst's compound database. See [ID Mappings](CRI_HMDB_KEGG_IDs.xlsx) for acceptable IDs and names. See [MetaboAnalyst](https://www.metaboanalyst.ca/MetaboAnalyst/resources/data/5_Enrichment%20Analysis.pdf) for more details about MSEA.
**Highlighted changes:** Metabolite Set Enrichment Analysis (MSEA) is implemented using MetaboAnalystR 3.0.3. If a list of feature IDs is supplied, the Over Representation Analysis (ORA) can be done. If a differential test is specified, the Quantitative Enrichment Analysis (QEA) can be done. To do the analysis, features need to be either HMDB or KEGG IDs, or a mixture of them. Alternatively, features can be metabolite names available in the MetaboAnalyst's compound database. See [ID Mappings](CRI_HMDB_KEGG_IDs.xlsx) for acceptable IDs and names and an ID conversion tool. See [MetaboAnalyst](https://www.metaboanalyst.ca/MetaboAnalyst/resources/data/5_Enrichment%20Analysis.pdf) for more details about MSEA.
