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Astrocyte
chipseq_analysis
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!11
Resolve "Include Phantompeakqualtools step"
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Merged
Resolve "Include Phantompeakqualtools step"
5-phantompeakcalls
into
master
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Venkat Malladi
requested to merge
5-phantompeakcalls
into
master
7 years ago
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#5 (closed)
Adds in phantompeakcalls step to produce plots.
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66e6c5cc
Merge branch 'master' into 5-phantompeakcalls
· 66e6c5cc
Venkat Malladi
authored
7 years ago
workflow/scripts/convert_reads.py
+
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@@ -109,7 +109,7 @@ def main():
bam_basename
=
os
.
path
.
basename
(
utils
.
strip_extensions
(
bam
,
[
'
.bam
'
]))
tag_filename
=
bam_basename
+
'
tagAlign.gz
'
tag_filename
=
bam_basename
+
'
.
tagAlign.gz
'
convert_mapped
(
bam
,
tag_filename
)
if
paired
:
# paired-end data
