Commits · 1ca6b372ac51949fc797b97482b5678b836c8db6 · BICF / Astrocyte / chipseq_analysis

May 14, 2019
- Add in python3 for motif serach. · 2c56b9c7
  Venkat Malladi authored 5 years ago
  
  2c56b9c7
- updated script pool_and_psuedoreplicates · f3bffff1
  Holly Ruess authored 5 years ago
  
  f3bffff1
May 06, 2019
- Covert back to files. · b18ced81
  Venkat Malladi authored 5 years ago
  
  b18ced81
- Fix association of file path. · cd167def
  Venkat Malladi authored 5 years ago
  
  cd167def
- Update main.nf to have file path for main.nf. · 9c53690d
  Venkat Malladi authored 5 years ago
  
  9c53690d
- Update diff peaks. · aa328cd4
  Venkat Malladi authored 5 years ago
  
  aa328cd4
May 02, 2019
- Updated changes suggested by Spencer and fix pipeline error. · 41fcff0b
  Venkat Malladi authored 5 years ago
  
  41fcff0b
Apr 23, 2019
- Fix test peak number. · 4dbedfbd
  Venkat Malladi authored 5 years ago
  
  4dbedfbd
- Fix test file error and missing modules. · 3065da66
  Venkat Malladi authored 5 years ago
  
  3065da66
Apr 22, 2019
- Update tests. · 38e33deb
  Venkat Malladi authored 5 years ago
  
  38e33deb
- Update regular variables. · 38d03ac0
  Venkat Malladi authored 5 years ago
  
  38d03ac0
- update astrocyte to use true false. · 61a87202
  Venkat Malladi authored 5 years ago
  
  61a87202
- Fix variable assignment. · b4a86fab
  Venkat Malladi authored 5 years ago
  
  b4a86fab
- Move single-end to run on astrocyte. · 3cf06f92
  Venkat Malladi authored 5 years ago
  
  3cf06f92
Apr 21, 2019
- Direct ouput correctly. · dafd3bc8
  Venkat Malladi authored 5 years ago
  
  dafd3bc8
- Revert changes. · d13047f0
  Venkat Malladi authored 5 years ago
  
  d13047f0
- Consistent with output syntax. · 6b279430
  Venkat Malladi authored 5 years ago
  
  6b279430
- Add in multiqc reports. · a7cb17d8
  Venkat Malladi authored 5 years ago
  
  a7cb17d8
- Add sample name to table. · a939b2d0
  Venkat Malladi authored 5 years ago
  
  a939b2d0
Apr 20, 2019
- Fix spacing for valid yaml. · 858210b9
  Venkat Malladi authored 5 years ago
  
  858210b9
- Move modules to main for astrocyte. · 34b002a0
  Venkat Malladi authored 5 years ago
  
  34b002a0
Apr 19, 2019
- Update tests and import of yaml. · 302a2915
  Venkat Malladi authored 5 years ago
  
  302a2915
Apr 18, 2019
- Update to be astrocyte compatible. · eb8e3e73
  Venkat Malladi authored 5 years ago
  
  eb8e3e73
- Add in software version generation. · 7a2acee9
  Venkat Malladi authored 5 years ago
  
  7a2acee9
Apr 17, 2019
- Fix software outout. · f3de8565
  Venkat Malladi authored 5 years ago
  
  f3de8565
- Revert distinct to first. · 1f9b2c71
  Venkat Malladi authored 5 years ago
  
  1f9b2c71
- Fix version variables. · b005d6f8
  Venkat Malladi authored 5 years ago
  
  b005d6f8
- Fix version files. · 8208d10e
  Venkat Malladi authored 5 years ago
  
  8208d10e
Apr 16, 2019
- Fix versions. · 96d867c7
  Venkat Malladi authored 5 years ago
  
  96d867c7
Apr 15, 2019
- Add in software output. · 7b47be12
  Venkat Malladi authored 5 years ago
  
  7b47be12
- Fix config for references. · 763ac90a
  Venkat Malladi authored 5 years ago
  
  763ac90a
Mar 20, 2019
- Make sum directories. · 15122e72
  Venkat Malladi authored 6 years ago
  
  15122e72
Mar 19, 2019
- Get only first value. · dd5c1333
  Venkat Malladi authored 6 years ago
  
  dd5c1333
Mar 17, 2019
- Add in if empty syntax. · fb1bfbb0
  Venkat Malladi authored 6 years ago
  
  fb1bfbb0
- Fix file path. · 84ea9d59
  Venkat Malladi authored 6 years ago
  
  84ea9d59
Mar 15, 2019
- Fix use of tool. · ae75a1a7
  Venkat Malladi authored 6 years ago
  
  ae75a1a7
- Fix path. · 867b9ec1
  Venkat Malladi authored 6 years ago
  
  867b9ec1
Mar 14, 2019
- Add in phantompeak in config. · a2571d3b
  Venkat Malladi authored 6 years ago
  
  a2571d3b
- Remove nextflow version. · 1c2936e4
  Venkat Malladi authored 6 years ago
  
  1c2936e4
- Add in tests. · ae8aa448
  Venkat Malladi authored 6 years ago
  
  ae8aa448