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Commit f545947d authored by Venkat Malladi's avatar Venkat Malladi
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Fix options.

parent 6bc954e9
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1 merge request!11Resolve "Include Phantompeakqualtools step"
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......@@ -239,12 +239,12 @@ process crossReads {
if (pairedEnd) {
"""
python3 $baseDir/scripts/xcor.py -b $seTagAlign -p
python3 $baseDir/scripts/xcor.py -t $seTagAlign -p
"""
}
else {
"""
python3 $baseDir/scripts/xcor.py -b $seTagAlign
python3 $baseDir/scripts/xcor.py -t $seTagAlign
"""
}
......
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