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Commit 88f2aae1 authored by Venkat Malladi's avatar Venkat Malladi
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Fix outdir syntax.

parent 254336c3
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1 merge request!8Resolve "Update deeptools"
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......@@ -165,7 +165,7 @@ process filterReads {
// Define channel collecting new design file
dedupDesign = dedupReads.
collectFile(name:'design_dedup.tsv', seed:"sample_id\tbam_reads\tbam_index\tbiosample\tfactor\ttreatment\treplicate\tcontrolId\n", storeDir:""$baseDir/output/design")
collectFile(name:'design_dedup.tsv', seed:"sample_id\tbam_reads\tbam_index\tbiosample\tfactor\ttreatment\treplicate\tcontrolId\n", storeDir:"$baseDir/output/design")
// Quality Metrics using deeptools
process experimentQC {
......
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