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chipseq_analysis
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BICF
Astrocyte
chipseq_analysis
Commits
6cbb7ab0
Commit
6cbb7ab0
authored
8 years ago
by
Beibei Chen
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Add nextflow config file
parent
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Merge develop into master
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astrocyte_package.yml
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6cbb7ab0
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@@ -7,19 +7,17 @@
# -----------------------------------------------------------------------------
# A unique identifier for the workflow package, text/underscores only
name
:
'
rnaseq
_bicf'
name
:
'
chipseq_analysis
_bicf'
# Who wrote this?
author
:
'
B
randi
Cantarel
'
author
:
'
B
eibei
Chen
'
# A contact email address for questions
email
:
'
biohpc-help@utsouthwestern.edu'
# A more informative title for the workflow package
title
:
'
BICF
RNAS
eq
Analysis
Workflow'
title
:
'
BICF
ChIP-s
eq
Analysis
Workflow'
# A summary of the workflow package in plain text
description
:
|
This is a workflow package for the BioHPC/BICF RNASeq workflow system.
It implements a simple RNASeq analysis workflow using TrimGalore, HiSAT,FeatureCounts,
StringTie and statistical analysis using EdgeR and Ballgown, plus a simple R Shiny
visualization application.
This is a workflow package for the BioHPC/BICF ChIP-seq workflow system.
It implements a simple ChIP-seq analysis workflow using deepTools, Diffbind, ChipSeeker MAnorm and MEME-CHIP, visualization application.
# -----------------------------------------------------------------------------
# DOCUMENTATION
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