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Commit 4b135733 authored by Venkat Malladi's avatar Venkat Malladi
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Fix logger syntax.

parent 84872f97
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1 merge request!5Resolve "Add mapping and trimming"
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workflow/scripts/qc_fastq.py
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...@@ -66,7 +66,7 @@ def main(): ...@@ -66,7 +66,7 @@ def main():
# Create a file handler # Create a file handler
handler = logging.FileHandler('qc.log') handler = logging.FileHandler('qc.log')
LOGGER.addHandler(handler) logger.addHandler(handler)
# Check if tools are present # Check if tools are present
check_tools() check_tools()
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workflow/scripts/trim_reads.py
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View file @ 4b135733
...@@ -74,7 +74,7 @@ def main(): ...@@ -74,7 +74,7 @@ def main():
# Create a file handler # Create a file handler
handler = logging.FileHandler('trim.log') handler = logging.FileHandler('trim.log')
LOGGER.addHandler(handler) logger.addHandler(handler)
# Check if tools are present # Check if tools are present
check_tools() check_tools()
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