From 4b135733b6cc7c7a8e6466b345cdeddf29794e6e Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Tue, 3 Oct 2017 14:06:14 -0500
Subject: [PATCH] Fix logger syntax.
---
workflow/scripts/qc_fastq.py | 2 +-
workflow/scripts/trim_reads.py | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/workflow/scripts/qc_fastq.py b/workflow/scripts/qc_fastq.py
index 95d8172..1d4f927 100755
--- a/workflow/scripts/qc_fastq.py
+++ b/workflow/scripts/qc_fastq.py
@@ -66,7 +66,7 @@ def main():
# Create a file handler
handler = logging.FileHandler('qc.log')
- LOGGER.addHandler(handler)
+ logger.addHandler(handler)
# Check if tools are present
check_tools()
diff --git a/workflow/scripts/trim_reads.py b/workflow/scripts/trim_reads.py
index 0ec719b..dae4605 100644
--- a/workflow/scripts/trim_reads.py
+++ b/workflow/scripts/trim_reads.py
@@ -74,7 +74,7 @@ def main():
# Create a file handler
handler = logging.FileHandler('trim.log')
- LOGGER.addHandler(handler)
+ logger.addHandler(handler)
# Check if tools are present
check_tools()
--
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