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Commit 44edba97 authored by Jeremy Mathews's avatar Jeremy Mathews
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Error Check Update path name

parent b127caa6
1 merge request!49Fix fasta file refernce and add check for correct genome version
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workflow/tests/test_motif_search.py
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...@@ -21,7 +21,7 @@ def test_limited_peaks_singleend(): ...@@ -21,7 +21,7 @@ def test_limited_peaks_singleend():
def test_motif_search_singleend(): def test_motif_search_singleend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'ENCSR238SGC.fa')) assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'ENCSR238SGC.fa'))
assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'index.html')) assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'index.html'))
assert os.path.getsize(test_output_path + 'ENCSR238SGC.fa') > 0 assert os.path.getsize(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'ENCSR238SGC.fa')) > 0
@pytest.mark.singleskip_true @pytest.mark.singleskip_true
def test_motif_search_singleend(): def test_motif_search_singleend():
...@@ -39,4 +39,4 @@ def test_limited_peaks_pairedend(): ...@@ -39,4 +39,4 @@ def test_limited_peaks_pairedend():
def test_motif_search_pairedend(): def test_motif_search_pairedend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'ENCSR729LGA.fa')) assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'ENCSR729LGA.fa'))
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'index.html')) assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'index.html'))
assert os.path.getsize(test_output_path + 'ENCSR729LGA.fa') > 0 assert os.path.getsize(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'ENCSR729LGA.fa')) > 0
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