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Commit 01c21d3c authored by Venkat Malladi's avatar Venkat Malladi
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Fix mapping of values.

parent 088309a4
1 merge request!13Resolve "Add in Macs2 support"
Pipeline #1214 failed with stage
in 2 hours, 18 minutes, and 59 seconds
......@@ -316,8 +316,10 @@ process poolAndPsuedoReads {
}
// Collect list of experiment design files into a single channel
experimentRows = experimentPoolObjs.collect()
.splitCsv(sep:'\t', header: true)
experimentRows = experimentPoolObjs
.collect()
.splitCsv(sep:'\t', header: true)
.map { row -> [ row.sample_id, row.tag_align, row.xcor, row.experiment_id, row.biosample, row.factor, row.treatment, row.replicate, row.control_id, row.control_tag_align] }
// Call Peaks using MACS
process callPeaksMACS {
......
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