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Commit 63660318 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Prevent error for ln test files if already exists

parent c33b5387
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1 merge request!21Develop
Pipeline #3659 passed with stages
in 1 minute and 44 seconds
......@@ -4,8 +4,8 @@ before_script:
- module load nextflow/0.31.1_Ignite
- mkdir -p test_data/simple1
- mkdir -p test_data/simple2
- ln -s /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_mkfastq/simple1/* test_data/simple1/
- ln -s /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_mkfastq/simple2/* test_data/simple2/
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_mkfastq/simple1/* test_data/simple1/
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_mkfastq/simple2/* test_data/simple2/
stages:
- astrocyte
......
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