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Commit fb55f7c1 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Slight formatting to match cellranger_mkfastq

parent 275a0a70
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3 merge requests!53Develop,!47Resolve "Add MultiQC",!46Resolve "Add MultiQC"
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...@@ -257,6 +257,8 @@ metricsSummary = metricsSummary211.mix(metricsSummary301, metricsSummary302) ...@@ -257,6 +257,8 @@ metricsSummary = metricsSummary211.mix(metricsSummary301, metricsSummary302)
// Generate MultiQC Report // Generate MultiQC Report
process multiqc { process multiqc {
tag "$name"
queue 'super'
publishDir "$outDir/${task.process}/$name", mode: 'copy' publishDir "$outDir/${task.process}/$name", mode: 'copy'
module 'multiqc/1.7' module 'multiqc/1.7'
...@@ -275,4 +277,4 @@ process multiqc { ...@@ -275,4 +277,4 @@ process multiqc {
sed -i '1s/^.*\tE/Sample\tE/' metrics_summary_mqc.tsv sed -i '1s/^.*\tE/Sample\tE/' metrics_summary_mqc.tsv
multiqc -c $multiqcConf . multiqc -c $multiqcConf .
""" """
} }
\ No newline at end of file
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