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Commit 4da781e7 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Add singularity to astrocyte

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1 merge request!70Develop
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CHANGELOG.md
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...@@ -14,6 +14,7 @@ ...@@ -14,6 +14,7 @@
* Use docker containers * Use docker containers
* Update CI * Update CI
* Add pipeline tracking tool * Add pipeline tracking tool
* Add singularity to astrocyte workflow_modules
*Known Bugs* *Known Bugs*
* Vizapp does not yet work for Astrocyte * Vizapp does not yet work for Astrocyte
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astrocyte_pkg.yml
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...@@ -39,6 +39,7 @@ documentation_files: ...@@ -39,6 +39,7 @@ documentation_files:
# A list of cluster environment modules that this workflow requires to run. # A list of cluster environment modules that this workflow requires to run.
# Specify versioned module names to ensure reproducability. # Specify versioned module names to ensure reproducability.
workflow_modules: workflow_modules:
- 'singularity/3.0.2'
- 'python/3.6.1-2-anaconda' - 'python/3.6.1-2-anaconda'
- 'cellranger/2.1.1' - 'cellranger/2.1.1'
- 'cellranger/3.0.1' - 'cellranger/3.0.1'
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