Remove quiet option from nextflow run ci

.gitlab-ci.yml

@@ -114,7 +114,7 @@ GRCh38-3.0.0:
   except:
     - tags
   script:
-  - nextflow -q run workflow/main.nf -profile biohpc,cluster --fastq "test_data/hu.v3s1r500/*.fastq.gz" --designFile "test_data/hu.v3s1r500/design.csv" --genome 'GRCh38-3.0.0' --kitVersion '3GEXv3' --version '3.1.0' --ci true
+  - nextflow run workflow/main.nf -profile biohpc,cluster --fastq "test_data/hu.v3s1r500/*.fastq.gz" --designFile "test_data/hu.v3s1r500/design.csv" --genome 'GRCh38-3.0.0' --kitVersion '3GEXv3' --version '3.1.0' --ci true
   - pytest -m count310
   artifacts:
     name: "$CI_JOB_NAME"
@@ -138,7 +138,7 @@ mm10-3.0.0:
   except:
     - tags
   script:
-  - nextflow -q run workflow/main.nf -profile biohpc,cluster --fastq "test_data/mu.v3s1r500/*.fastq.gz" --designFile "test_data/mu.v3s1r500/design.csv" --genome 'mm10-3.0.0' --kitVersion '3GEXv3' --version '3.1.0' --ci true
+  - nextflow run workflow/main.nf -profile biohpc,cluster --fastq "test_data/mu.v3s1r500/*.fastq.gz" --designFile "test_data/mu.v3s1r500/design.csv" --genome 'mm10-3.0.0' --kitVersion '3GEXv3' --version '3.1.0' --ci true
   - pytest -m count310
   artifacts:
     name: "$CI_JOB_NAME"
@@ -160,7 +160,7 @@ mm10-3.0.0:
       - master
       - tags
   script:
-  - nextflow -q run workflow/main.nf -profile biohpc,cluster --fastq "test_data/hu.v3s2r10k/*.fastq.gz" --designFile "test_data/hu.v3s2r10k/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'auto' --version '3.1.0' --ci true
+  - nextflow run workflow/main.nf -profile biohpc,cluster --fastq "test_data/hu.v3s2r10k/*.fastq.gz" --designFile "test_data/hu.v3s2r10k/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'auto' --version '3.1.0' --ci true
   - pytest -m count310
   artifacts:
     name: "$CI_JOB_NAME"