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BICF
Astrocyte
cellranger_count
Commits
23af414c
There was a problem fetching the pipeline stages.
Commit
23af414c
authored
6 years ago
by
Gervaise Henry
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Change astrocyte param to be select
parent
b0677edf
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2 merge requests
!29
Develop
,
!26
Develop
Pipeline
#3235
failed with stages
in 7 seconds
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2 changed files
astrocyte_pkg.yml
+5
-3
5 additions, 3 deletions
astrocyte_pkg.yml
workflow/conf/biohpc.config
+3
-3
3 additions, 3 deletions
workflow/conf/biohpc.config
with
8 additions
and
6 deletions
astrocyte_pkg.yml
+
5
−
3
View file @
23af414c
...
...
@@ -151,10 +151,12 @@ workflow_parameters:
10x cellranger version.
-
id
:
astrocyte
type
:
string
required
:
true
type
:
select
default
:
'
true'
regex
:
"
true"
choices
:
-
[
'
true'
,
'
true'
]
required
:
true
regex
:
'
true'
description
:
|
Ensure configuraton for astrocyte.
...
...
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workflow/conf/biohpc.config
+
3
−
3
View file @
23af414c
...
...
@@ -9,15 +9,15 @@ process {
}
$
count211
{
module
= [
'cellranger/2.1.1'
]
memory
=
'120
GB'
queue
=
'128GB,256GB,256GBv1,384
GB'
}
$
count301
{
module
= [
'cellranger/3.0.1'
]
memory
=
'120
GB'
queue
=
'128GB,256GB,256GBv1,384
GB'
}
$
count302
{
module
= [
'cellranger/3.0.2'
]
memory
=
'120
GB'
queue
=
'128GB,256GB,256GBv1,384
GB'
}
}
...
...
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