Update configuration for queue to fix large number of reads.

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• This comment contains a description of changes (with reason)
• CHANGELOG.md is updated

Closes #43 (closed)

workflow/main.nf

@@ -213,6 +213,7 @@ process alignReads {
 
   tag "${sampleId}-${replicate}"
   publishDir "${outDir}/${task.process}/${sampleId}", mode: 'copy'
+  queue '256GB,256GBv1'
 
   input:
     set sampleId, reads, experimentId, replicate, fqLength from trimmedReads
@@ -264,6 +265,7 @@ process filterReads {
 
   tag "${sampleId}-${replicate}"
   publishDir "${outDir}/${task.process}/${sampleId}", mode: 'copy'
+  queue '128GB,256GB,256GBv1'
 
   input:
     set sampleId, mapped, experimentId, replicate from mappedReads
@@ -326,6 +328,7 @@ process convertReads {
 
   tag "${sampleId}-${replicate}"
   publishDir "${outDir}/${task.process}", mode: 'copy'
+  queue '128GB,256GB,256GBv1'
 
   input:
     set sampleId, deduped, bai, experimentId, replicate from convertReads
@@ -501,6 +504,7 @@ process callPeaksMACS {
 
   tag "${sampleId}-${replicate}"
   publishDir "${outDir}/${task.process}/${experimentId}/${replicate}", mode: 'copy'
+  queue '128GB,256GB,256GBv1'
 
   input:
     set sampleId, tagAlign, xcor, experimentId, replicate from experimentRows
@@ -638,6 +642,7 @@ process peakAnnotation {
 process experimentQC {
 
   publishDir "${outDir}/${task.process}", mode: 'copy'
+  queue '128GB,256GB,256GBv1'
 
   input:
     file designExperimentQC