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Commit ec9f9468 authored by Holly Ruess's avatar Holly Ruess
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fix CI test

parent b2129f4e
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1 merge request!10Resolve "Fix Experiment QC"
Pipeline #5294 passed with stages
in 9 hours, 39 minutes, and 36 seconds
......@@ -27,45 +27,14 @@ def design_bam():
def test_coverage_singleend_human():
assert os.path.exists(os.path.join(test_output_path, 'sample_mbs.npz'))
assert os.path.exists(os.path.join(test_output_path, 'coverage.pdf'))
@pytest.mark.singleend_human
def test_spearman_singleend_human():
assert os.path.exists(os.path.join(test_output_path, 'heatmap_SpearmanCorr.pdf'))
@pytest.mark.singleend_human
def test_pearson_singleend_human():
assert os.path.exists(os.path.join(test_output_path, 'heatmap_PearsonCorr.pdf'))
@pytest.mark.singleend_human
def test_fingerprint_singleend_human():
assert os.path.exists(os.path.join(test_output_path, 'ENCLB170KFO_fingerprint.pdf'))
assert os.path.exists(os.path.join(test_output_path, 'ENCLB969KTX_fingerprint.pdf'))
@pytest.mark.pairedend_mouse
def test_coverage_pairedend_mouse():
assert os.path.exists(os.path.join(test_output_path, 'sample_mbs.npz'))
assert os.path.exists(os.path.join(test_output_path, 'coverage.pdf'))
@pytest.mark.pairedend_mouse
def test_spearman_pairedend_mouse():
assert os.path.exists(os.path.join(test_output_path, 'heatmap_SpearmanCorr.pdf'))
@pytest.mark.pairedend_mouse
def test_pearson_pairedend_mouse():
assert os.path.exists(os.path.join(test_output_path, 'heatmap_PearsonCorr.pdf'))
@pytest.mark.pairedend_mouse
def test_fingerprint_pairedend_mouse():
assert os.path.exists(os.path.join(test_output_path, 'ENCLB749GLW_fingerprint.pdf'))
assert os.path.exists(os.path.join(test_output_path, 'ENCLB122XDP_fingerprint.pdf'))
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