Commit b45e8a00 authored by Holly Ruess's avatar Holly Ruess

fix testing error

parent 8e447c31
......@@ -20,7 +20,7 @@ single_end_human:
- branches
- master
script:
- nextflow run workflow/main.nf
- NXF_OPTS="-Dleveldb.mmap=false" nextflow run workflow/main.nf
- pytest -m singleend_human
......@@ -30,5 +30,5 @@ paired_end_mouse:
- branches
- master
script:
- nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR451NAE_PE.txt" --genome 'GRCm38' --pairedEnd true --blacklist true
- NXF_OPTS="-Dleveldb.mmap=false" nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR451NAE_PE.txt" --genome 'GRCm38' --pairedEnd true --blacklist true
- pytest -m pairedend_mouse
......@@ -507,6 +507,7 @@ process consensusPeaks {
output:
file '*.replicated.*' into consensusPeaks
file '*.rejected.*' into rejectedPeaks
file '*.replicated_noblacklist*' optional true into blPeaks
file("design_exQC.tsv") into designExperimentQC
file('version_*.txt') into consensusPeaksVersions
......
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