Remove TSS enrich.

workflow/main.nf

@@ -269,27 +269,27 @@ process convertReads {
 }
 
 // Calculate TSS Enrichment
-process tssEnrich {
-
-  tag "$sampleId-$replicate"
-  publishDir "$baseDir/output/${task.process}", mode: 'copy'
-
-  input:
-
-  set sampleId, deduped, bai, experimentId, biosample, factor, treatment, replicate from tssEnrich
-
-
-  output:
-
-  file '*.png' into atacQC
-
-  script:
-
-  """
-  singularity run /project/shared/bicf_workflow_ref/singularity_images/bicf-metaseq:0.1.0.simg $baseDir/scripts/atac_qc.py -b $deduped -p $sampleId -t $tssFile -c $chromSizes
-  """
-
-}
+//process tssEnrich {
+//
+//  tag "$sampleId-$replicate"
+//  publishDir "$baseDir/output/${task.process}", mode: 'copy'
+//
+//  input:
+//
+//  set sampleId, deduped, bai, experimentId, biosample, factor, treatment, replicate from tssEnrich
+//
+//
+//  output:
+//
+//  file '*.png' into atacQC
+//
+//  script:
+//
+//  """
+//  singularity run /project/shared/bicf_workflow_ref/singularity_images/bicf-metaseq:0.1.0.simg $baseDir/scripts/atac_qc.py -b $deduped -p $sampleId -t $tssFile -c $chromSizes
+//  """
+//
+//}
 
 // Calculate Cross-correlation using phantompeaktools
 process crossReads {