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Commit 4c48db63 authored by Venkat Malladi's avatar Venkat Malladi
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Fix unicode error.

parent 3e8e46fb
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......@@ -6,14 +6,14 @@ from io import StringIO
import check_design
DESIGN_STRING = """sample_id\texperiment_id\tbiosample\tfactor\ttreatment\treplicate\tfastq_read1
DESIGN_STRING = r"""sample_id\texperiment_id\tbiosample\tfactor\ttreatment\treplicate\tfastq_read1
A_1\tA\tLiver\None\tNone\t1\tA_1.fastq.gz
A_2\tA\tLiver\None\tNone\t2\tA_2.fastq.gz
B_1\tB\tLiver\None\tNone\t1\tB_1.fastq.gz
B_2\tB\tLiver\None\tNone\t2\tB_2.fastq.gz
"""
FASTQ_STRING = """
FASTQ_STRING = r"""
A_1.fastq.gz\t/path/to/file/A_1.fastq.gz
A_2.fastq.gz\t/path/to/file/A_2.fastq.gz
B_1.fastq.gz\t/path/to/file/B_1.fastq.gz
......
......@@ -9,7 +9,7 @@ import os
test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
'/../output/design/'
DESIGN_STRING = """sample_id\ttag_align\txcor\tbiosample\tfactor\ttreatment\treplicate
DESIGN_STRING = r"""sample_id\ttag_align\txcor\tbiosample\tfactor\ttreatment\treplicate
A_1\tA_1.tagAlign.gz\tA\tLiver\None\tNone\t1
A_2\tA_2.tagAlign.gz\tA\tLiver\None\tNone\t2
B_1\tB_1.tagAlign.gz\tB\tLiver\None\tNone\t1
......
......@@ -10,7 +10,7 @@ import overlap_peaks
test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
'/../output/consensusPeaks/'
DESIGN_STRING = """sample_id\tbam_reads\tbam_index\texperiment_id\tbiosample\tfactor\ttreatment\treplicate
DESIGN_STRING = r"""sample_id\tbam_reads\tbam_index\texperiment_id\tbiosample\tfactor\ttreatment\treplicate
A_1\tA_1.bam\tA_1.bai\tA\tLiver\tNone\tNone\t1
A_2\tA_2.bam\tA_2.bai\tA\tLiver\tNone\tNone\t2
B_1\tB_1.bam\tB_1.bai\tB\tLiver\tNone\tNone\t1
......
......@@ -9,7 +9,7 @@ import pool_and_psuedoreplicate
test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
'/../output/design/'
DESIGN_STRING = """sample_id\ttag_align\txcor\tbiosample\tfactor\ttreatment\treplicate
DESIGN_STRING = r"""sample_id\ttag_align\txcor\tbiosample\tfactor\ttreatment\treplicate
A_1\tA_1.bedse.gz\tA_1.cc.qc\tLiver\tH3K27ac\tNone\t1
A_2\tA_2.bedse.gz\tA_2.cc.qc\tLiver\tH3K27ac\tNone\t2
"""
......
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