Fixt the tomogram contrast config

test/s210/catm/config.py

@@ -19,6 +19,7 @@ tomoID = split_path[-2]
 prefix = tomoID + ".test1.catm"
 input_folder = "inputs/"
 tomogram = input_folder + tomoID + ".test1.lps25.mrc"
+black_on_white = 1 # The contrast of tomogram, 0 if the particle has white contrast (positive values)
 
 templates = [input_folder + "mono-8Apx-lps30-box30-rot12-core.mrc"]
 contour_level = [0.2]

test/s210/tm/config.py

@@ -19,6 +19,7 @@ tomoID = split_path[-2]
 prefix = tomoID + ".test1"
 input_folder = "inputs/"
 tomogram = input_folder + tomoID + ".test1.lps25.mrc"
+black_on_white = 1 # The contrast of tomogram, 0 if the particle has white contrast (positive values)
 
 templates = [input_folder + "mono-8Apx-lps30-box30-rot12-core.mrc"]
 contour_level = [0.2]