updates to load into Answer; CNVKit with Samtools and using haar for small panels (f431810c) · Commits · NGS CLIA Lab / process_scripts · GitLab

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NGS CLIA Lab
process_scripts
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f431810c

Commit f431810c authored 5 years ago by

Brandi Cantarel

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updates to load into Answer; CNVKit with Samtools and using haar for small panels

parent 956a3813

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Changes 6

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alignment/filter_genefusions.pl 1 addition, 1 deletion

alignment/filter_genefusions.pl
alignment/viralalign.sh 48 additions, 0 deletions

alignment/viralalign.sh
variants/cnvkit.sh 14 additions, 7 deletions

variants/cnvkit.sh
variants/filter_delly.pl 8 additions, 1 deletion

variants/filter_delly.pl
variants/filter_svaba.pl 1 addition, 0 deletions

variants/filter_svaba.pl
variants/svcalling.sh 2 additions, 1 deletion

variants/svcalling.sh

with 74 additions and 10 deletions

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