updates for version3 (c6d8d42c) · Commits · NGS CLIA Lab / process_scripts · GitLab

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NGS CLIA Lab
process_scripts
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c6d8d42c

Commit c6d8d42c authored 6 years ago by

Brandi Cantarel

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updates for version3

parent f14a813e

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Changes 7

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alignment/dnaseqalign.sh 19 additions, 9 deletions

alignment/dnaseqalign.sh
alignment/markdups.sh 2 additions, 2 deletions

alignment/markdups.sh
variants/filter_pindel.pl 1 addition, 1 deletion

variants/filter_pindel.pl
variants/gatkrunner.sh 16 additions, 6 deletions

variants/gatkrunner.sh
variants/germline_vc.sh 30 additions, 37 deletions

variants/germline_vc.sh
variants/somatic_vc.sh 15 additions, 24 deletions

variants/somatic_vc.sh
variants/unionvcf.pl 2 additions, 4 deletions

variants/unionvcf.pl

with 85 additions and 83 deletions

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