Move scripts over for general use. (963980bc) · Commits · NGS CLIA Lab / process_scripts · GitLab

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NGS CLIA Lab
process_scripts
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963980bc

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Commit 963980bc authored 6 years ago by

Venkat Malladi

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Move scripts over for general use.

parent d8aed0d8

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Changes 13

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alignment/convert_reads.py 126 additions, 0 deletions

alignment/convert_reads.py
alignment/map_qc.py 294 additions, 0 deletions

alignment/map_qc.py
alignment/map_reads.py 203 additions, 0 deletions

alignment/map_reads.py
call_peaks/call_peaks_macs.py 274 additions, 0 deletions

call_peaks/call_peaks_macs.py
call_peaks/overlap_peaks.py 212 additions, 0 deletions

call_peaks/overlap_peaks.py
call_peaks/pool_and_psuedoreplicate.py 291 additions, 0 deletions

call_peaks/pool_and_psuedoreplicate.py
cross_correlation/xcor.py 131 additions, 0 deletions

cross_correlation/xcor.py
design_file/check_design.py 163 additions, 0 deletions

design_file/check_design.py
design_file/experiment_design.py 84 additions, 0 deletions

design_file/experiment_design.py
preproc_fastq/trim_reads.py 99 additions, 0 deletions

preproc_fastq/trim_reads.py
python_utils/utils.py 131 additions, 0 deletions

python_utils/utils.py
quality_metrics/experiment_qc.py 180 additions, 0 deletions

quality_metrics/experiment_qc.py
quality_metrics/xcor.py 131 additions, 0 deletions

quality_metrics/xcor.py

with 2319 additions and 0 deletions

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