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WIP Resolve "Put reference building script into Snippets"

Jonathan Gesell requested to merge 37-Put-reference-build-into-Snippets into develop

Please fill in the appropriate checklist below (delete those which are not relevant). These are the most common things requested on pull requests.

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated
  • Replace dag.png with the most recent CI pipleine integrated_pe artifact
  • Replace software_versions_mqc.yaml with the most recent CI pipleine generateVersions artifact
  • Replace software_references_mqc.yaml with the most recent CI pipleine generateVersions artifact
  • CHANGELOG.md is updated
  • README.md is updated
  • LICENSE.md is updated with new contributors
  • Docker images moved to production release and changed in pipeline
  • Docker images used in the CI unit tests match those used in pipeline

/cc @ghenry @venkat.malladi

Edited by Jonathan Gesell

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