Merge requests · BICF

Imaging table filtering.

BICF/KCE/kce_etl!7 · created Nov 23, 2019 by Venkat Malladi
- Merged
updated Nov 23, 2019
Update lab_orcids.md

onboarding!15 · created Nov 16, 2019 by Venkat Malladi
- Merged
updated Nov 16, 2019
Resolve "Cleanup process outputs"

BICF/Astrocyte/cellranger_mkfastq!56 · created Nov 07, 2019 by Gervaise Henry v2.1.5
enhancement
updated Nov 07, 2019
Remove publish dirs for intermediate processes

BICF/Astrocyte/cellranger_mkfastq!55 · created Nov 07, 2019 by Gervaise Henry v2.1.5
enhancement
- Closed
updated Nov 07, 2019
Revert patients to unknown.

BICF/KCE/kce_etl!6 · created Oct 28, 2019 by Venkat Malladi
- Merged
updated Oct 28, 2019
Fix date output.

BICF/KCE/kce_etl!5 · created Oct 25, 2019 by Venkat Malladi
- Merged
updated Oct 26, 2019
Fix output.

BICF/KCE/kce_etl!4 · created Oct 24, 2019 by Venkat Malladi
- Merged
updated Oct 24, 2019
Transform germline gene tables.

BICF/KCE/kce_etl!3 · created Oct 24, 2019 by Venkat Malladi
updated Oct 24, 2019
WIP: Resolve "Cancer Gene Table"

BICF/KCE/kce_etl!2 · created Oct 24, 2019 by Venkat Malladi
- Closed
updated Oct 24, 2019
Deleted workflow/output/.gitkeep, workflow/main-aws.nf files

BICF/Astrocyte/sra_pipeline!43 · created Oct 08, 2019 by Jonathan Gesell
Updates testing
updated Oct 09, 2019
Aws test

BICF/Astrocyte/sra_pipeline!42 · created Oct 08, 2019 by Jonathan Gesell AWS Functionality
Updates testing
updated Oct 09, 2019
WIP: Aws

BICF/Astrocyte/sra_pipeline!41 · created Oct 08, 2019 by Jonathan Gesell AWS Functionality
Updates testing
- Closed
updated Oct 08, 2019
Updated to bicfbase:1.3

BICF/Astrocyte/sra_pipeline!40 · created Oct 01, 2019 by Jonathan Gesell
Updates
updated Oct 01, 2019
Updated to most recent images

BICF/Astrocyte/sra_pipeline!39 · created Oct 01, 2019 by Jonathan Gesell
Updates
- Closed
updated Oct 01, 2019
Resolve "Update to bicfbase:1.1"

BICF/Astrocyte/sra_pipeline!38 · created Oct 01, 2019 by Jonathan Gesell
Updates
- Closed
updated Oct 01, 2019
Add Mingjie.

onboarding!14 · created Sep 26, 2019 by Venkat Malladi
- Merged
updated Sep 26, 2019
Add in vitals conversion.

BICF/KCE/kce_etl!1 · created Sep 25, 2019 by Venkat Malladi
updated Sep 25, 2019
Update lab_orcids.md

onboarding!13 · created Sep 19, 2019 by Mingjie Li
- Closed
updated Sep 26, 2019
Update paired-end diff to skip this test. 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!60 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
updated Sep 17, 2019
WIP: Resolve "Testing fails on new update"

BICF/Astrocyte/chipseq_analysis!59 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
- Closed
updated Sep 16, 2019