Merge requests · BICF

Resolve "Change location of multiqc config and name"

BICF/Astrocyte/cellranger_mkfastq!15 · created Apr 22, 2019 by Gervaise Henry
To Do
updated Apr 22, 2019
Resolve "Cancer Drug Table"

BICF/KCE/kce_etl!10 · created Dec 12, 2019 by Venkat Malladi
- Merged
updated Dec 12, 2019
Resolve "callPeaksMACS exits when data is bad" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!62 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 29, 2020
Resolve "BUG: thread error on Astrocyte"

BICF/Astrocyte/cellranger_count!59 · created Feb 21, 2020 by Gervaise Henry v2.1.1
Doing bug confirmed critical
updated Feb 21, 2020
Resolve "blank page on survival plot download"

BICF/Astrocyte/tcga_shiny!14 · created May 22, 2019 by Jeremy Mathews 1.0.1
bug
updated May 22, 2019
Resolve "Blacklist of regions" 5 of 5 checklist items completed

BICF/Astrocyte/atacseq_analysis!25 · created Jun 09, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jun 09, 2020
Resolve "Bam Stats and Filter"

BICF/Astrocyte/chipseq_analysis!6 · created Oct 11, 2017 by Venkat Malladi master
updated Oct 11, 2017
Resolve "Astrocyte fixes" 4 of 4 checklist items completed

BICF/Astrocyte/atacseq_analysis!28 · created Jun 19, 2020 by Venkat Malladi master
updated Jun 21, 2020
Resolve "Astrocyte Bug Fixes" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!46 · created May 16, 2019 by Venkat Malladi 1.0.4 master
bug
updated May 16, 2019
Resolve "Annotate peaks" 5 of 6 checklist items completed

BICF/Astrocyte/atacseq_analysis!26 · created Jun 11, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jun 11, 2020
Resolve "annotate peaks" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!57 · created Aug 05, 2019 by Jeremy Mathews 1.1.1 master
enhancement
- Merged
- 2
updated Aug 12, 2019
Resolve "Add tests for imaging"

BICF/KCE/kce_etl!8 · created Dec 12, 2019 by Venkat Malladi
- Merged
updated Dec 12, 2019
Resolve "Add testing scripts"

BICF/Astrocyte/sra_pipeline!1 · created May 03, 2019 by Jonathan Gesell
testing
- Merged
updated May 03, 2019
Resolve "Add testing badges" 2 of 2 checklist items completed

BICF/Astrocyte/sra_pipeline!59 · created Jun 17, 2020 by Venkat Malladi
updated Jun 17, 2020
Resolve "Add references to multiqc report" and Update README

BICF/Astrocyte/cellranger_mkfastq!37 · created Jun 26, 2019 by Jeremy Mathews v1.2.0
To Do enhancement
updated Jun 26, 2019
Resolve "Add pytest to CI"

BICF/Astrocyte/cellranger_count!51 · created Jul 23, 2019 by Gervaise Henry v1.1.0
To Do documentation
updated Jul 23, 2019
Resolve "Add pytest to CI"

BICF/Astrocyte/cellranger_mkfastq!40 · created Jul 19, 2019 by Jeremy Mathews v1.2.0
To Do documentation
updated Jul 22, 2019
Resolve "add plotProfile" 5 of 5 checklist items completed

BICF/Astrocyte/chipseq_analysis!55 · created Jul 18, 2019 by Jeremy Mathews 1.1.1 master
enhancement
- Merged
- 4
updated Jul 19, 2019
Resolve "Add percent of reads - mitochondria" 5 of 5 checklist items completed

BICF/Astrocyte/atacseq_analysis!16 · created Mar 24, 2020 by Holly Ruess Version 2.0 master
enhancment
- Merged
- 1
updated Mar 24, 2020
Resolve "Add params from biohpc.config into main.nf"

BICF/Astrocyte/cellranger_count!17 · created Mar 11, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0)
updated Mar 11, 2019