Merge requests · BICF

Resolve "TSS enrichment score" 0 of 6 checklist items completed

BICF/Astrocyte/atacseq_analysis!21 · created May 28, 2020 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated May 28, 2020
Develop

BICF/Astrocyte/cellranger_count!70 · created May 25, 2020 by Gervaise Henry v2.1.1 master
updated May 25, 2020
Resolve "Add FRiP score" 5 of 5 checklist items completed

BICF/Astrocyte/atacseq_analysis!20 · created May 13, 2020 by Venkat Malladi Version 2.0 master
enhancment
updated May 13, 2020
Resolve "Add FRiP score" 0 of 6 checklist items completed

BICF/Astrocyte/atacseq_analysis!19 · created May 13, 2020 by Holly Ruess Version 2.0 master
enhancment
- Closed
- 1
updated May 13, 2020
Added logic to allow for multiple SRAs to be linked to a single number, while...

BICF/Astrocyte/sra_pipeline!57 · created Apr 30, 2020 by Jonathan Gesell 15-SOLID_Sequencing
Bug fixes Doing
updated May 26, 2020
Remove multiqc module 3 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!69 · created Apr 26, 2020 by Gervaise Henry
To Do bug
updated Apr 26, 2020
Track.pipeline 3 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!68 · created Apr 25, 2020 by Gervaise Henry
updated Apr 25, 2020
Track.pipeline

BICF/Astrocyte/sra_pipeline!56 · created Apr 25, 2020 by Gervaise Henry
updated Apr 28, 2020
Develop 1 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!67 · created Apr 20, 2020 by Gervaise Henry v2.1.1 master
updated Apr 20, 2020
Add ulimit -u to all cellranger processes 2 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!66 · created Apr 20, 2020 by Gervaise Henry v2.1.1
Doing To Do bug confirmed critical
updated Apr 20, 2020
Resolve "Paired-end Diffbind peaks gives different answer" after changing random 2 of 2 checklist items completed

BICF/Astrocyte/chipseq_analysis!69 · created Apr 17, 2020 by Venkat Malladi 1.1.0 master
Test bug
updated Apr 20, 2020
Drop indev in version, finish adding aws details

BICF/Astrocyte/cellranger_count!65 · created Apr 16, 2020 by Gervaise Henry
updated Apr 16, 2020
Master

BICF/Astrocyte/cellranger_count!64 · created Apr 16, 2020 by Gervaise Henry
updated Apr 16, 2020
Develop 6 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!63 · created Apr 15, 2020 by Gervaise Henry master
updated Apr 15, 2020
Resolve "Containerize"

BICF/Astrocyte/cellranger_count!62 · created Apr 15, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Resolve "Update params to current standards"

BICF/Astrocyte/cellranger_count!61 · created Apr 14, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Resolve "Add 3':5' param"

BICF/Astrocyte/cellranger_count!60 · created Apr 14, 2020 by Gervaise Henry v2.1.1
Doing critical enhancement
- Merged
updated Apr 14, 2020
Add in quiet option.

onboarding!25 · created Apr 14, 2020 by Venkat Malladi
- Merged
updated Apr 14, 2020
Resolve "CI and Nextflow configuration"

onboarding!24 · created Apr 13, 2020 by Venkat Malladi
- Merged
- 6
updated Apr 13, 2020
Add software development.

onboarding!23 · created Apr 08, 2020 by Venkat Malladi
- Merged
updated Apr 08, 2020