Merge requests · BICF

Resolve "Use SampleIds/ Experiment Id as file names throughtout pipeline"

BICF/Astrocyte/chipseq_analysis!20 · created Mar 09, 2019 by Venkat Malladi master
- Merged
updated Mar 10, 2019
Resolve "updateUnitTests" 4 of 5 checklist items completed

BICF/Astrocyte/sra_pipeline!58 · created Jun 16, 2020 by Jonathan Gesell
Bug fixes Updates testing
- Merged
- 1
- 1
updated Jun 17, 2020
Resolve "Update to Singularity Image 2.0.0 compatability."

BICF/Astrocyte/sra_pipeline!50 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
updated Feb 06, 2020
Resolve "Update to Singularity Image 2.0.0 compatability."

BICF/Astrocyte/sra_pipeline!48 · created Feb 05, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
updated Feb 05, 2020
Resolve "Update to bicfbase:1.1"

BICF/Astrocyte/sra_pipeline!36 · created Sep 10, 2019 by Jonathan Gesell Astrocyte Functionality
Updates error correction
updated Sep 10, 2019
Resolve "Update params to current standards"

BICF/Astrocyte/cellranger_count!61 · created Apr 14, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Resolve "Update outside collaboration fee structure"

onboarding!26 · created Jul 14, 2020 by Venkat Malladi
- Merged
updated Jul 14, 2020
Resolve "Update orcid Jason and Holly"

onboarding!27 · created Aug 31, 2020 by Venkat Malladi
- Merged
updated Aug 31, 2020
Resolve "Update documentation"

BICF/Astrocyte/chipseq_analysis!35 · created Apr 29, 2019 by Venkat Malladi 1.0.0 master
documentation enhancement
- Merged
- 1
updated May 06, 2019
Resolve "Update Documentation"

BICF/Astrocyte/cellranger_mkfastq!7 · created Apr 10, 2019 by Gervaise Henry Astrocyte Production (v1.0.0)
updated Apr 10, 2019
Resolve "Update Documentation"

BICF/Astrocyte/cellranger_count!31 · created Mar 25, 2019 by Gervaise Henry
updated Mar 25, 2019
Resolve "Update deeptools"

BICF/Astrocyte/chipseq_analysis!8 · created Oct 18, 2017 by Venkat Malladi 1.0.0 master
updated Oct 18, 2017
Resolve "update check design file"

BICF/Astrocyte/atacseq_analysis!3 · created Dec 09, 2019 by Holly Ruess Version 2.0 master
enhancment
- Merged
- 2
updated Dec 09, 2019
Resolve "Update cancer gene"

BICF/KCE/kce_etl!12 · created Oct 19, 2020 by Venkat Malladi
- Merged
- Approved
updated Oct 19, 2020
Resolve "Update Astrocyte documentation and errors"

BICF/Astrocyte/chipseq_analysis!30 · created Apr 22, 2019 by Venkat Malladi 1.0.0 master
bug
updated Apr 22, 2019
Resolve "TSS enrichment score" 5 of 5 checklist items completed

BICF/Astrocyte/atacseq_analysis!22 · created May 28, 2020 by Venkat Malladi Version 2.0 master
enhancment
updated May 28, 2020
Resolve "TOC - Fee Structure"

onboarding!17 · created Dec 24, 2019 by Venkat Malladi
- Merged
updated Dec 24, 2019
Resolve "Tests for astrocyte" 4 of 4 checklist items completed

BICF/Astrocyte/atacseq_analysis!27 · created Jun 12, 2020 by Venkat Malladi master
updated Jun 18, 2020
Resolve "Test for kitVersion=3 and version=2.1.1 and exit if true"

BICF/Astrocyte/cellranger_count!52 · created Jul 23, 2019 by Jeremy Mathews v1.1.0
enhancement
updated Jul 23, 2019
Resolve "Test Astrocyte"

BICF/Astrocyte/chipseq_analysis!25 · created Apr 21, 2019 by Venkat Malladi 1.0.0 master
critical
updated Apr 21, 2019