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Commit 7ac33a32 authored by John Lafin's avatar John Lafin
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Uncomment download commands

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test_data/fetch_test_data_pbmc.sh
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View file @ 7ac33a32
......@@ -3,14 +3,14 @@
mkdir -p fastqs_pbmc/
# Fetch PBMC donor 3
#curl -O https://cf.10xgenomics.com/samples/cell-exp/9.0.0/5k_Human_Donor3_PBMC_3p_gem-x_Multiplex/5k_Human_Donor3_PBMC_3p_gem-x_Multiplex_fastqs.tar
curl -O https://cf.10xgenomics.com/samples/cell-exp/9.0.0/5k_Human_Donor3_PBMC_3p_gem-x_Multiplex/5k_Human_Donor3_PBMC_3p_gem-x_Multiplex_fastqs.tar
tar -xf 5k_Human_Donor3_PBMC_3p_gem-x_Multiplex_fastqs.tar
mv 5k_Human_Donor3_PBMC_3p_gem-x_GEX_fastqs/* fastqs_pbmc/
rm -r 5k_Human_Donor3_PBMC_3p_gem-x_GEX_fastqs
rm 5k_Human_Donor3_PBMC_3p_gem-x_Multiplex_fastqs.tar
# Fetch PBMC donor 4
#curl -O https://cf.10xgenomics.com/samples/cell-exp/9.0.0/5k_Human_Donor4_PBMC_3p_gem-x_Multiplex/5k_Human_Donor4_PBMC_3p_gem-x_Multiplex_fastqs.tar
curl -O https://cf.10xgenomics.com/samples/cell-exp/9.0.0/5k_Human_Donor4_PBMC_3p_gem-x_Multiplex/5k_Human_Donor4_PBMC_3p_gem-x_Multiplex_fastqs.tar
tar -xf 5k_Human_Donor4_PBMC_3p_gem-x_Multiplex_fastqs.tar
mv 5k_Human_Donor4_PBMC_3p_gem-x_GEX_fastqs/* fastqs_pbmc/
rm -r 5k_Human_Donor4_PBMC_3p_gem-x_GEX_fastqs
......
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