Add task_id to output dir

workflow/main.nf

@@ -29,7 +29,7 @@ process cr_count {
         path(fastq)
         
     output:
-        tuple val(sample), path("${sample}/outs/**")
+        tuple val(sample), path("${task.index}_${sample}/outs/**")
 
     script:
         // Check reference
@@ -66,7 +66,7 @@ process cr_count {
         
         // Run Cell Ranger count
         """
-        cellranger count --id=$sample \
+        cellranger count --id=${task.index}_${sample} \
         --transcriptome=$ref \
         --fastqs=. \
         --sample=$sample \