biohpc.config

singularity {
  enabled = true
  runOptions = '--disable-cache'                                // use this one for production
  // runOptions = '--disable-cache --bind /vagrant:/vagrant'    // use this one for vagrant development env only
  cacheDir = "$baseDir/images/singularity"
}

process {
    executor = 'local'
    withName:uppercase {
        container = 'docker://ubuntu:latest'
    }
    withName:tolines {
        container = 'docker://ubuntu:latest'
    }
    withName:wordcounts {
        container = 'docker://centos:centos8'
    }
}