.gitignore

README.md

atacseq/.devcontainer/devcontainer.json

atacseq/.editorconfig

atacseq/.gitpod.yml

atacseq/.nf-core.yml

atacseq/.pre-commit-config.yaml

atacseq/.prettierignore

atacseq/.prettierrc.yml

atacseq/CHANGELOG.md

atacseq/CITATIONS.md

atacseq/README.md

atacseq/docs/images/nf-core-atacseq_logo_dark.png

atacseq/docs/images/nf-core-atacseq_logo_light.png

atacseq/docs/images/nf-core-atacseq_metro_map_grey.png

atacseq/docs/images/nf-core-atacseq_metro_map_grey.svg

atacseq/docs/usage.md

atacseq/lib/Utils.groovy

atacseq/lib/nfcore_external_java_deps.jar

atacseq/main.nf